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One Health (OH) Knowledge Base Epi
Inventory of epidemiological data sources, epidemiological studies, standards, methods/approaches for data analysis and interpretation, modelling and decision support for...-
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Variant detection
NGS is frequently used to identify mutations in DNA samples from individual patients or experimental organisms. Sequencing can be done at the whole-genome scale; RNA-seq, which...-
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Risk- Based Prioritisation
Determining which hazards should be selected for surveillance based on information about the probability of their occurrence and the extent of biologic and/or economic...-
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Core Genome MLST (CGMLST)
Strain differentiation by determining the number different alleles in a predefined set of loci that represents core genes.-
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Shared Definition
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Shared Definition
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West Nile Virus
flavivirus (genus Flavivirus) that causes an illness marked by fever, headache, muscle ache, skin rash, and sometimes encephalitis or meningitis, which is spread chiefly by...-
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Foodborne Pathogen
A pathogen present in food, which may cause human disease(s) or illness through consumption of food contaminated with the pathogen and / or the biological products produced by...-
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Food Handler
Any person who directly handles packaged or unpackaged food, food equipment and utensils, or food contact surfaces and is therefore expected to comply with food hygiene...-
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Mortality Rate
The mortality rate or death rate is the mortality expressed as a proportion of the population.-
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Consensus Sequence
When two or more DNA sequences are aligned, the overlapping portions can be combined to create a single consensus sequence. In positions where all overlapping sequences have the...-
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Disease Outbreak
WHO: A disease outbreak is the occurrence of cases of disease in excess of what would normally be expected in a defined community, geographical area or season. An outbreak may...-
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Shared Definition
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Performance monitoring and evaluation
Whether performance indicators are routinely used to monitor system performance and periodic external evaluations are used to assess the system outputs in relation to its...-
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Arboviral Diseases
Shortened form of arthropod-borne virus. Any of a group of viruses that are transmitted to man and animals by arthopods such as mosquitoes, ticks, and sand flies; they include...-
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Gap Analysis
A technique that is used to determine what steps need to be taken in order to move from its current state to its desired, future state. Also called need-gap analysis, needs...-
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Shared Definition
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Environmental Contamination
introduction into water, air and/or soil of microorganisms, chemicals, toxic substances, wastes or waste water in a concentration that makes the medium (water, air and/or soil)...-
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Public Health
The art and science of dealing with the protection and improvement of community health by organized community effort and including preventive medicine and sanitary and social...-
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Surveillance sensitivity: Outbreak detection
The probability that the surveillance system will detect a significant increase (outbreak) of disease. This requires a clear definition of what constitutes an outbreak.-
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Shared Definition
